| Nus Waro | Kaimana | 0.00 km² | — | — |
| Olobi Yef Foron Island | Raja Ampat | 0.00 km² | — | — |
| Pandera Pat Island | Raja Ampat | 0.00 km² | — | — |
| Saban Kecil Island | Raja Ampat | 0.00 km² | — | — |
| Sayonufori Island | Yapen Islands | 0.00 km² | — | — |
| Sensau Island | Jayapura | 0.00 km² | — | — |
| Sife Ain Anak Island | Tanimbar Islands | 0.00 km² | — | — |
| Sindilabono Island | Raja Ampat | 0.00 km² | — | — |
| Sitpopoyef Les Island | Raja Ampat | 0.00 km² | — | — |
| Suandey Island | Teluk Wondama | 0.00 km² | — | — |
| Sunmalelen Kapatcol Masos Island | Raja Ampat | 0.00 km² | — | — |
| Tatun Balengan Island | Tanimbar Islands | 0.00 km² | — | — |
| Tifanunusa Timur Island | Fakfak | 0.00 km² | — | — |
| Usnikaleb Palolono Island | Raja Ampat | 0.00 km² | — | — |
| Vatvyah Island | Southeast Maluku | 0.00 km² | — | — |
| Wacoke Lim Island | Raja Ampat | 0.00 km² | — | — |
| Wahiawilhukifui Island | Aru Islands Regency | 0.00 km² | — | — |
| Wakatalis Yef Tolea Island | Raja Ampat | 0.00 km² | — | — |
| Watbabal Island | Eastern Seram | 0.00 km² | — | — |
| Wayaban Yef Saruri Bahalle Island | Raja Ampat | 0.00 km² | — | — |
| Yabatan Tol Island | Raja Ampat | 0.00 km² | — | — |
| Yapap Niyeftolea Island | Raja Ampat | 0.00 km² | — | — |
| Yapap Yef Mul Island | Raja Ampat | 0.00 km² | — | — |
| Yef Balaubo | Raja Ampat | 0.00 km² | — | — |
| Yef Inyoto Palolo | Raja Ampat | 0.00 km² | — | — |
| Yef Kapat Mirinle | Raja Ampat | 0.00 km² | — | — |
| Yef Kuin Genan | Raja Ampat | 0.00 km² | — | — |
| Yef Laferanus Nit | Kaimana | 0.00 km² | — | — |
| Yef Langgasanit Vat | Kaimana | 0.00 km² | — | — |
| Yef Mana | Raja Ampat | 0.00 km² | — | — |
| Yef Mana | Raja Ampat | 0.00 km² | — | — |
| Yef Mandaeta Eganana | Kaimana | 0.00 km² | — | — |
| Yef Mangufualar Semus | Kaimana | 0.00 km² | — | — |
| Yef Mangufualar Vat | Kaimana | 0.00 km² | — | — |
| Yef Marewanus | Kaimana | 0.00 km² | — | — |
| Yef Miwara Rim Uit | Kaimana | 0.00 km² | — | — |
| Yef Monda Nit | Kaimana | 0.00 km² | — | — |
| Yef Ndamandama Semus | Kaimana | 0.00 km² | — | — |
| Yef Paniki Utara | Kaimana | 0.00 km² | — | — |
| Yef Sair | Kaimana | 0.00 km² | — | — |
| Yef Sartominusu | Kaimana | 0.00 km² | — | — |
| Yef Sikkenus Semus | Kaimana | 0.00 km² | — | — |
| Yef Swaramnus | Kaimana | 0.00 km² | — | — |
| Yef Temeneinus | Kaimana | 0.00 km² | — | — |
| Yef Towat | Raja Ampat | 0.00 km² | — | — |
| Yef Walera Luar | Kaimana | 0.00 km² | — | — |
| Yef Worpaduai | Teluk Wondama | 0.00 km² | — | — |
| Yefpyan Nikapatcol Tolentole Island | Raja Ampat | 0.00 km² | — | — |
| Yolep Nikapatcol Nilentao Island | Raja Ampat | 0.00 km² | — | — |
| Abris Island | Raja Ampat | 0.00 km² | — | — |
| Auja Kalim Na Lu Island | Raja Ampat | 0.00 km² | — | — |
| Auri Island | Teluk Wondama | 0.00 km² | — | — |
| Bagan Island | Fakfak | 0.00 km² | — | — |
| Balbulol Nikapatcol Tolentau Island | Raja Ampat | 0.00 km² | — | — |
| Bama Island | Aru Islands Regency | 0.00 km² | — | — |
| Batbitiem Sawi Island | Raja Ampat | 0.00 km² | — | — |
| Batbitim Yef Lanampale Island | Raja Ampat | 0.00 km² | — | — |
| Batcor Dol Island | Tanimbar Islands | 0.00 km² | — | — |
| Batiflang Atakanak Island | Tanimbar Islands | 0.00 km² | — | — |
| Batlayery Island | Tanimbar Islands | 0.00 km² | — | — |
| Batu Kapal Besar Island | Eastern Seram | 0.00 km² | — | — |
| Batu Kitikiti Selatan Island | Fakfak | 0.00 km² | — | — |
| Batu Tawar Timur Island | Fakfak | 0.00 km² | — | — |
| Batu Tiga Laut Island | Tanimbar Islands | 0.00 km² | — | — |
| Batu Yop Island | Teluk Wondama | 0.00 km² | — | — |
| Belbagenan Palay Island | Raja Ampat | 0.00 km² | — | — |
| Beturfarfar Island | Fakfak | 0.00 km² | — | — |
| Bo Yef Gamuru Island | Raja Ampat | 0.00 km² | — | — |
| Dapunlol Yef Kacuo Tolea Island | Raja Ampat | 0.00 km² | — | — |
| Dayan Sawi Island | Raja Ampat | 0.00 km² | — | — |
| Dua Tengah Island | Fakfak | 0.00 km² | — | — |
| Elkuruk Island | Tual | 0.00 km² | — | — |
| Gamfi Kapatcol Tofat Island | Raja Ampat | 0.00 km² | — | — |
| Gasal Leatsa Island | Raja Ampat | 0.00 km² | — | — |
| Gemfin Island | Aru Islands Regency | 0.00 km² | — | — |
| Gosong Balak Island | Raja Ampat | 0.00 km² | — | — |
| Inji Island | Jayapura | 0.00 km² | — | — |
| Jomwohia Island | Aru Islands Regency | 0.00 km² | — | — |
| Kacaa Lafamailim Island | Raja Ampat | 0.00 km² | — | — |
| Kacaa Lu Island | Raja Ampat | 0.00 km² | — | — |
| Kalulus Lafamaitol Island | Raja Ampat | 0.00 km² | — | — |
| Kangieri Island | Teluk Wondama | 0.00 km² | — | — |
| Kapatbus Island | Raja Ampat | 0.00 km² | — | — |
| Kapatdayan Sawi Island | Raja Ampat | 0.00 km² | — | — |
| Karibar Lempuang Besar Island | Fakfak | 0.00 km² | — | — |
| Karundauni Katu Island | Teluk Wondama | 0.00 km² | — | — |
| Kasam Yef Macois Mudlol Island | Raja Ampat | 0.00 km² | — | — |
| Kobus Ni Nuu Island | Raja Ampat | 0.00 km² | — | — |
| Kuincolon Island | Raja Ampat | 0.00 km² | — | — |
| Kusa Kecil Island | Teluk Wondama | 0.00 km² | — | — |
| Lampu Utara Island | Tanimbar Islands | 0.00 km² | — | — |
| Leleyawar Kou Island | Tanimbar Islands | 0.00 km² | — | — |
| Lengkalogos Niyef Ganan Tonafatabuo Island | Raja Ampat | 0.00 km² | — | — |
| Locahni Yefto Wagalafo Island | Raja Ampat | 0.00 km² | — | — |
| Makoka Island | Eastern Seram | 0.00 km² | — | — |
| Malekpon Ai Lafa Island | Raja Ampat | 0.00 km² | — | — |
| Mandirwar Island | Teluk Wondama | 0.00 km² | — | — |
| Mangasar Mansaup Sa Island | Tanimbar Islands | 0.00 km² | — | — |
| Mate Lu Island | Raja Ampat | 0.00 km² | — | — |
| Meos Imbyuwer | Raja Ampat | 0.00 km² | — | — |